Studies

Papers read in Advanced Topics in Bioinformatics Course

A systematic comparison and evaluation of biclustering methods for gene expression data (pdf)
Authors: Amela Prelic, Stefan Bleuler, Philip Zimmermann, Anja Wille, Peter Buhlmann, Wilhelm Gruissem, Lars Hennig, Lothar Thiele and Eckart Zitzler
Publication: Bioinformatics Magazine
Computing the maximum similarity bi-clusters of gene expression data (pdf)
Authors: Xiaowen Liu and Lusheng Wang
Publications: Bioinformatics Magazine
In search of functional association from time-series microarray data based on the change trend and level of gene expression (pdf)
Authors: Feng He and An-Ping Zeng
Publication: BMC Bioinformatics
Uncovering protein interaction in abstracts and text using a novel linear model and word proximity networks (pdf)
Authors: Alaa Abi-Haidar, Jasleen Kaur, Ana Maguitman, Predrag Radivojac, Andreas Rechtsteiner, Karin Verspoor, ZhipingWang and Luis M Rocha
Publications: Genome Biology Magazine
Using support vector machine combined with auto covariance to predict protein–protein interactions from protein sequences (pdf)
Authors: Yanzhi Guo, Lezheng Yu, Zhining Wen and Menglong Li
Publications: Nucleacids Research
Context-sensitive data integration and prediction of biological networks (pdf)
Authors: Chad L. Myers and Olga G. Troyanskaya
Publication: Bioinformatics Magazine